Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.58□□□□□ -0.24
VBP1P61758 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VBP1P61758 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
VBP1P61758 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VBP1P61758 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
VBP1P61758 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
VBP1P61758 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
VBP1P61758 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.57□□□□□ -0.24
VBP1P61758 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
VBP1P61758 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 FOSL1P1-201ENST00000511041 816 ntBASIC13.57□□□□□ -0.24
VBP1P61758 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
VBP1P61758 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.57□□□□□ -0.24
VBP1P61758 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.57□□□□□ -0.24
VBP1P61758 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.57□□□□□ -0.24
VBP1P61758 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.57□□□□□ -0.24
VBP1P61758 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.57□□□□□ -0.24
VBP1P61758 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.57□□□□□ -0.24
VBP1P61758 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VBP1P61758 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 AC073869.1-201ENST00000415574 2762 ntBASIC13.56□□□□□ -0.24
VBP1P61758 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VBP1P61758 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 TCAM1P-207ENST00000485295 1537 ntBASIC13.56□□□□□ -0.24
VBP1P61758 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.56□□□□□ -0.24
VBP1P61758 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.56□□□□□ -0.24
VBP1P61758 AL356488.2-201ENST00000602755 427 ntBASIC13.56□□□□□ -0.24
VBP1P61758 NPAP1P7-201ENST00000613027 823 ntBASIC13.56□□□□□ -0.24
VBP1P61758 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms