Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN8P56748 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN8P56748 DOC2GP-202ENST00000514950 1163 ntBASIC14.36□□□□□ -0.11
CLDN8P56748 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.36□□□□□ -0.11
CLDN8P56748 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN8P56748 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN8P56748 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN8P56748 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 AC041040.2-201ENST00000622926 2899 ntBASIC14.36□□□□□ -0.11
CLDN8P56748 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 AL928921.2-201ENST00000641325 2442 ntBASIC14.36□□□□□ -0.11
CLDN8P56748 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN8P56748 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLDN8P56748 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN8P56748 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CLDN8P56748 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
CLDN8P56748 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN8P56748 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN8P56748 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 METTL21AP1-201ENST00000438852 635 ntBASIC14.35□□□□□ -0.11
CLDN8P56748 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN8P56748 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN8P56748 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.35□□□□□ -0.11
CLDN8P56748 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN8P56748 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.35□□□□□ -0.11
CLDN8P56748 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.35□□□□□ -0.11
CLDN8P56748 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN8P56748 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.35□□□□□ -0.11
CLDN8P56748 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN8P56748 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN8P56748 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN8P56748 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CLDN8P56748 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN8P56748 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN8P56748 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN8P56748 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms