Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC055876.3-201ENST00000431496 288 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 AC244107.1-201ENST00000442033 332 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 INGX-202ENST00000489074 768 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 SLC25A39P2-201ENST00000537614 270 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.42□□□□□ -0.1
NR1H2P55055 AC138649.4-201ENST00000612222 287 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 MIR6080-201ENST00000617359 66 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NR1H2P55055 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NR1H2P55055 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NR1H2P55055 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NR1H2P55055 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.42□□□□□ -0.1
NR1H2P55055 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 AC118758.2-201ENST00000614242 2813 ntBASIC14.42□□□□□ -0.1
NR1H2P55055 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR1H2P55055 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 AC130686.1-201ENST00000622936 2466 ntBASIC14.41□□□□□ -0.1
NR1H2P55055 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NR1H2P55055 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.41□□□□□ -0.1
NR1H2P55055 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.41□□□□□ -0.1
NR1H2P55055 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 SPDYE14P-201ENST00000442619 822 ntBASIC14.41□□□□□ -0.1
NR1H2P55055 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 AC105233.2-201ENST00000523697 349 ntBASIC14.41□□□□□ -0.1
NR1H2P55055 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 AF228730.5-201ENST00000530288 346 ntBASIC14.41□□□□□ -0.1
NR1H2P55055 ALG1L8P-201ENST00000533887 760 ntBASIC14.41□□□□□ -0.1
NR1H2P55055 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.41□□□□□ -0.1
NR1H2P55055 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.41□□□□□ -0.1
NR1H2P55055 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NR1H2P55055 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.41□□□□□ -0.1
NR1H2P55055 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR1H2P55055 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NR1H2P55055 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NR1H2P55055 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms