Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 AC108725.1-201ENST00000495472 409 ntBASIC15.9■□□□□ 0.14
LHX1P48742 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX1P48742 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX1P48742 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 FAM8A2P-201ENST00000528813 1142 ntBASIC15.9■□□□□ 0.14
LHX1P48742 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.9■□□□□ 0.14
LHX1P48742 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.9■□□□□ 0.14
LHX1P48742 AL358472.3-201ENST00000608147 415 ntBASIC15.9■□□□□ 0.14
LHX1P48742 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 AP001002.3-201ENST00000623482 206 ntBASIC15.9■□□□□ 0.14
LHX1P48742 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.9■□□□□ 0.14
LHX1P48742 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX1P48742 TCAF2P1-201ENST00000291129 2421 ntBASIC15.9■□□□□ 0.14
LHX1P48742 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX1P48742 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX1P48742 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LHX1P48742 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LHX1P48742 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.9■□□□□ 0.14
LHX1P48742 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 AC009093.2-202ENST00000620513 2079 ntBASIC15.9■□□□□ 0.14
LHX1P48742 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX1P48742 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX1P48742 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
LHX1P48742 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX1P48742 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 HSPB1P2-201ENST00000448722 546 ntBASIC15.89■□□□□ 0.13
LHX1P48742 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 AC100850.1-201ENST00000506768 649 ntBASIC15.89■□□□□ 0.13
LHX1P48742 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.89■□□□□ 0.13
LHX1P48742 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX1P48742 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX1P48742 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.89■□□□□ 0.13
LHX1P48742 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX1P48742 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX1P48742 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 AC008825.2-201ENST00000603374 718 ntBASIC15.89■□□□□ 0.13
LHX1P48742 BX088702.1-201ENST00000610784 235 ntBASIC15.89■□□□□ 0.13
LHX1P48742 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.89■□□□□ 0.13
LHX1P48742 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX1P48742 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX1P48742 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LHX1P48742 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.88■□□□□ 0.13
LHX1P48742 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.88■□□□□ 0.13
LHX1P48742 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LHX1P48742 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LHX1P48742 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.88■□□□□ 0.13
LHX1P48742 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LHX1P48742 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LHX1P48742 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LHX1P48742 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms