Protein–RNA interactions for Protein: P47898

HTR5A, 5-hydroxytryptamine receptor 5A, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR5AP47898 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.35□□□□□ -0.27
HTR5AP47898 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.35□□□□□ -0.27
HTR5AP47898 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HTR5AP47898 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HTR5AP47898 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
HTR5AP47898 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HTR5AP47898 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.34□□□□□ -0.27
HTR5AP47898 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.34□□□□□ -0.27
HTR5AP47898 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR5AP47898 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.34□□□□□ -0.27
HTR5AP47898 AC092552.1-201ENST00000547243 906 ntBASIC13.34□□□□□ -0.27
HTR5AP47898 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR5AP47898 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.34□□□□□ -0.27
HTR5AP47898 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.34□□□□□ -0.27
HTR5AP47898 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HTR5AP47898 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 AL158070.2-201ENST00000623713 1621 ntBASIC13.34□□□□□ -0.27
HTR5AP47898 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
HTR5AP47898 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 AC093525.8-201ENST00000624099 1342 ntBASIC13.34□□□□□ -0.27
HTR5AP47898 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.34□□□□□ -0.27
HTR5AP47898 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.34□□□□□ -0.27
HTR5AP47898 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HTR5AP47898 LINC01101-201ENST00000622953 1884 ntBASIC13.33□□□□□ -0.27
HTR5AP47898 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HTR5AP47898 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HTR5AP47898 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.33□□□□□ -0.27
HTR5AP47898 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HTR5AP47898 AC007686.3-201ENST00000619017 3487 ntBASIC13.33□□□□□ -0.27
HTR5AP47898 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HTR5AP47898 AC013726.1-201ENST00000563747 2285 ntBASIC13.33□□□□□ -0.28
HTR5AP47898 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR5AP47898 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HTR5AP47898 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 PIN1P1-201ENST00000412108 996 ntBASIC13.33□□□□□ -0.28
HTR5AP47898 AC098850.1-201ENST00000419919 790 ntBASIC13.33□□□□□ -0.28
HTR5AP47898 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR5AP47898 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR5AP47898 AP001582.1-201ENST00000525856 295 ntBASIC13.33□□□□□ -0.28
HTR5AP47898 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR5AP47898 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR5AP47898 AL359711.2-201ENST00000563105 872 ntBASIC13.33□□□□□ -0.28
HTR5AP47898 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HTR5AP47898 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR5AP47898 AC140912.1-201ENST00000577171 1054 ntBASIC13.33□□□□□ -0.28
HTR5AP47898 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR5AP47898 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR5AP47898 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms