Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM8A3P-201ENST00000427218 844 ntBASIC16.17■□□□□ 0.18
SSR1P43307 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.17■□□□□ 0.18
SSR1P43307 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SSR1P43307 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
SSR1P43307 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SSR1P43307 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSR1P43307 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 DMBT1P1-203ENST00000636837 4628 ntBASIC16.16■□□□□ 0.18
SSR1P43307 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR1P43307 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
SSR1P43307 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR1P43307 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR1P43307 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR1P43307 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.16■□□□□ 0.18
SSR1P43307 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AC135586.1-201ENST00000539323 574 ntBASIC16.16■□□□□ 0.18
SSR1P43307 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.16■□□□□ 0.18
SSR1P43307 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.16■□□□□ 0.18
SSR1P43307 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
SSR1P43307 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SSR1P43307 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 AC012508.2-201ENST00000567613 1472 ntBASIC16.16■□□□□ 0.18
SSR1P43307 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSR1P43307 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.16■□□□□ 0.18
SSR1P43307 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 AL731571.1-201ENST00000617058 5428 ntBASIC16.15■□□□□ 0.18
SSR1P43307 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.15■□□□□ 0.18
SSR1P43307 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSR1P43307 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.15■□□□□ 0.18
SSR1P43307 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms