Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HMGCLP35914 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HMGCLP35914 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HMGCLP35914 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HMGCLP35914 AL390755.1-201ENST00000623716 2027 ntBASIC14.99□□□□□ -0.01
HMGCLP35914 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCLP35914 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HMGCLP35914 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 AC234783.1-201ENST00000441761 496 ntBASIC14.98□□□□□ -0.01
HMGCLP35914 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGCLP35914 AL590640.2-201ENST00000457038 527 ntBASIC14.98□□□□□ -0.01
HMGCLP35914 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGCLP35914 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.98□□□□□ -0.01
HMGCLP35914 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGCLP35914 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.98□□□□□ -0.01
HMGCLP35914 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 RHOXF1P1-202ENST00000635473 501 ntBASIC14.98□□□□□ -0.01
HMGCLP35914 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMGCLP35914 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.98□□□□□ -0.01
HMGCLP35914 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 AP000593.2-201ENST00000542775 1433 ntBASIC14.98□□□□□ -0.01
HMGCLP35914 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HMGCLP35914 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCLP35914 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCLP35914 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.98□□□□□ -0.01
HMGCLP35914 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMGCLP35914 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
HMGCLP35914 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGCLP35914 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 AC106881.1-201ENST00000605849 3329 ntBASIC14.97□□□□□ -0.01
HMGCLP35914 RN7SKP230-201ENST00000365642 335 ntBASIC14.97□□□□□ -0.01
HMGCLP35914 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGCLP35914 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.97□□□□□ -0.01
HMGCLP35914 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGCLP35914 AC138951.2-201ENST00000623455 1161 ntBASIC14.97□□□□□ -0.01
HMGCLP35914 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HMGCLP35914 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HMGCLP35914 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 MTHFR-210ENST00000641407 2387 ntBASIC14.97□□□□□ -0.01
HMGCLP35914 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGCLP35914 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HMGCLP35914 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGCLP35914 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms