Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 AP006294.1-201ENST00000415407 339 ntBASIC13.89□□□□□ -0.19
SHC1P29353 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 RPL13AP25-201ENST00000484130 612 ntBASIC13.89□□□□□ -0.19
SHC1P29353 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.89□□□□□ -0.19
SHC1P29353 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 AC027307.3-201ENST00000594262 1100 ntBASIC13.89□□□□□ -0.19
SHC1P29353 AC133539.2-201ENST00000604757 467 ntBASIC13.89□□□□□ -0.19
SHC1P29353 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.89□□□□□ -0.19
SHC1P29353 RPSAP52-203ENST00000622976 1023 ntBASIC13.89□□□□□ -0.19
SHC1P29353 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 KRT8P22-201ENST00000562317 1415 ntBASIC13.89□□□□□ -0.19
SHC1P29353 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SHC1P29353 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
SHC1P29353 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SHC1P29353 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.88□□□□□ -0.19
SHC1P29353 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SHC1P29353 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.88□□□□□ -0.19
SHC1P29353 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.88□□□□□ -0.19
SHC1P29353 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
SHC1P29353 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.88□□□□□ -0.19
SHC1P29353 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.88□□□□□ -0.19
SHC1P29353 AL033527.5-201ENST00000641382 801 ntBASIC13.88□□□□□ -0.19
SHC1P29353 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 LINC01230-201ENST00000625222 3017 ntBASIC13.88□□□□□ -0.19
SHC1P29353 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SHC1P29353 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.88□□□□□ -0.19
SHC1P29353 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 AL138799.1-201ENST00000448213 1675 ntBASIC13.88□□□□□ -0.19
SHC1P29353 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 AC041040.2-201ENST00000622926 2899 ntBASIC13.88□□□□□ -0.19
SHC1P29353 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SHC1P29353 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
SHC1P29353 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 INTS4P1-203ENST00000641008 3683 ntBASIC13.87□□□□□ -0.19
SHC1P29353 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHC1P29353 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.87□□□□□ -0.19
SHC1P29353 C8orf49-201ENST00000525043 1968 ntBASIC13.87□□□□□ -0.19
SHC1P29353 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHC1P29353 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHC1P29353 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms