Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CCNA2P20248 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNA2P20248 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNA2P20248 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.34□□□□□ -0.11
CCNA2P20248 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 FO393414.2-201ENST00000405153 598 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 SERBP1P3-201ENST00000459980 809 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 AC067863.1-201ENST00000494933 530 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 AC140878.1-201ENST00000565277 250 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 AC051619.7-201ENST00000568314 623 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.34□□□□□ -0.11
CCNA2P20248 AC097359.3-201ENST00000603982 1210 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 AC093512.1-201ENST00000617969 520 ntBASIC14.34□□□□□ -0.11
CCNA2P20248 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNA2P20248 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.34□□□□□ -0.11
CCNA2P20248 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNA2P20248 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCNA2P20248 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CCNA2P20248 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 AC097359.2-201ENST00000604992 2389 ntBASIC14.33□□□□□ -0.11
CCNA2P20248 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.33□□□□□ -0.11
CCNA2P20248 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.33□□□□□ -0.11
CCNA2P20248 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNA2P20248 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.33□□□□□ -0.11
CCNA2P20248 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCNA2P20248 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNA2P20248 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
CCNA2P20248 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.33□□□□□ -0.12
CCNA2P20248 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.33□□□□□ -0.12
CCNA2P20248 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNA2P20248 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.33□□□□□ -0.12
CCNA2P20248 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNA2P20248 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.33□□□□□ -0.12
CCNA2P20248 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNA2P20248 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.33□□□□□ -0.12
CCNA2P20248 TEX28P1-201ENST00000613479 1221 ntBASIC14.33□□□□□ -0.12
CCNA2P20248 TEX28P2-201ENST00000617764 1221 ntBASIC14.33□□□□□ -0.12
CCNA2P20248 AL033527.5-202ENST00000641632 1098 ntBASIC14.33□□□□□ -0.12
CCNA2P20248 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCNA2P20248 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms