Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.28■□□□□ 0.36
BMP3P12645 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
BMP3P12645 ZBED1P1-201ENST00000502364 1930 ntBASIC17.28■□□□□ 0.36
BMP3P12645 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BMP3P12645 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.28■□□□□ 0.36
BMP3P12645 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.28■□□□□ 0.36
BMP3P12645 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.28■□□□□ 0.36
BMP3P12645 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.28■□□□□ 0.36
BMP3P12645 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.28■□□□□ 0.36
BMP3P12645 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 BX088702.1-201ENST00000610784 235 ntBASIC17.28■□□□□ 0.36
BMP3P12645 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.28■□□□□ 0.36
BMP3P12645 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.28■□□□□ 0.36
BMP3P12645 AC091951.1-201ENST00000512854 2465 ntBASIC17.28■□□□□ 0.36
BMP3P12645 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
BMP3P12645 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
BMP3P12645 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
BMP3P12645 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP3P12645 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BMP3P12645 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BMP3P12645 AC013268.4-201ENST00000637413 2228 ntBASIC17.27■□□□□ 0.36
BMP3P12645 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BMP3P12645 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.27■□□□□ 0.36
BMP3P12645 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BMP3P12645 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 GCOM2-201ENST00000509133 1104 ntBASIC17.27■□□□□ 0.36
BMP3P12645 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.27■□□□□ 0.36
BMP3P12645 AC131206.1-201ENST00000538078 1211 ntBASIC17.27■□□□□ 0.36
BMP3P12645 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.27■□□□□ 0.36
BMP3P12645 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.27■□□□□ 0.36
BMP3P12645 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP3P12645 AC005324.6-201ENST00000587972 613 ntBASIC17.27■□□□□ 0.36
BMP3P12645 AC132192.2-201ENST00000596206 1147 ntBASIC17.27■□□□□ 0.36
BMP3P12645 NDUFV2P1-201ENST00000596415 907 ntBASIC17.27■□□□□ 0.36
BMP3P12645 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BMP3P12645 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.27■□□□□ 0.36
BMP3P12645 AC004923.1-202ENST00000642106 209 ntBASIC17.27■□□□□ 0.36
BMP3P12645 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BMP3P12645 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP3P12645 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BMP3P12645 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.27■□□□□ 0.35
BMP3P12645 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.27■□□□□ 0.35
BMP3P12645 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.27■□□□□ 0.35
BMP3P12645 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP3P12645 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP3P12645 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP3P12645 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
BMP3P12645 AC004899.1-201ENST00000424687 1714 ntBASIC17.27■□□□□ 0.35
BMP3P12645 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.27■□□□□ 0.35
BMP3P12645 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
BMP3P12645 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BMP3P12645 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BMP3P12645 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP3P12645 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
BMP3P12645 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BMP3P12645 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP3P12645 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms