Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 GPR182-203ENST00000622922 591 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 AC132938.4-201ENST00000623835 848 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 FGD5P1-202ENST00000614866 2498 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 AJ011931.1-201ENST00000618749 2492 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 AC114812.1-204ENST00000449669 728 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 AC099548.2-209ENST00000480264 625 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.69□□□□□ -0.22
FREM3P0C091 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.69□□□□□ -0.22
FREM3P0C091 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
FREM3P0C091 AC005695.3-201ENST00000614522 232 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.69□□□□□ -0.22
FREM3P0C091 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
FREM3P0C091 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.68□□□□□ -0.22
FREM3P0C091 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.68□□□□□ -0.22
FREM3P0C091 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
FREM3P0C091 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FREM3P0C091 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 AC006001.1-201ENST00000325130 474 ntBASIC13.68□□□□□ -0.22
FREM3P0C091 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 AC104306.2-201ENST00000451877 341 ntBASIC13.68□□□□□ -0.22
FREM3P0C091 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
FREM3P0C091 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.68□□□□□ -0.22
FREM3P0C091 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
FREM3P0C091 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
FREM3P0C091 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FREM3P0C091 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 BCYRN1-201ENST00000418539 200 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.67□□□□□ -0.22
FREM3P0C091 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 FAM45BP-202ENST00000592932 1624 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 AC055811.4-201ENST00000624039 1754 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms