Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.21■□□□□ 0.03
RETP07949 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.21■□□□□ 0.03
RETP07949 AC021723.1-201ENST00000486306 515 ntBASIC15.21■□□□□ 0.03
RETP07949 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.21■□□□□ 0.03
RETP07949 AC106794.1-201ENST00000506935 792 ntBASIC15.21■□□□□ 0.03
RETP07949 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.21■□□□□ 0.03
RETP07949 AC005730.2-201ENST00000564549 1184 ntBASIC15.21■□□□□ 0.03
RETP07949 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.21■□□□□ 0.03
RETP07949 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.21■□□□□ 0.03
RETP07949 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
RETP07949 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.21■□□□□ 0.03
RETP07949 LINC02228-204ENST00000642115 2962 ntBASIC15.21■□□□□ 0.03
RETP07949 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.21■□□□□ 0.03
RETP07949 AC138035.3-201ENST00000622706 2791 ntBASIC15.21■□□□□ 0.03
RETP07949 LRRC59-203ENST00000576448 1531 ntBASIC15.21■□□□□ 0.03
RETP07949 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RETP07949 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
RETP07949 KRT8P29-201ENST00000420409 1371 ntBASIC15.21■□□□□ 0.02
RETP07949 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RETP07949 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RETP07949 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RETP07949 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RETP07949 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RETP07949 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RETP07949 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RETP07949 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.2■□□□□ 0.02
RETP07949 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 DPM3-202ENST00000368399 517 ntBASIC15.2■□□□□ 0.02
RETP07949 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RETP07949 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.2■□□□□ 0.02
RETP07949 AL354877.1-201ENST00000424412 413 ntBASIC15.2■□□□□ 0.02
RETP07949 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.2■□□□□ 0.02
RETP07949 AC006335.1-201ENST00000445200 547 ntBASIC15.2■□□□□ 0.02
RETP07949 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.2■□□□□ 0.02
RETP07949 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.2■□□□□ 0.02
RETP07949 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.2■□□□□ 0.02
RETP07949 RN7SL713P-201ENST00000582127 302 ntBASIC15.2■□□□□ 0.02
RETP07949 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.2■□□□□ 0.02
RETP07949 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.2■□□□□ 0.02
RETP07949 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.2■□□□□ 0.02
RETP07949 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.2■□□□□ 0.02
RETP07949 RN7SL736P-201ENST00000613111 269 ntBASIC15.2■□□□□ 0.02
RETP07949 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.2■□□□□ 0.02
RETP07949 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 CICP13-201ENST00000422015 2789 ntBASIC15.2■□□□□ 0.02
RETP07949 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.2■□□□□ 0.02
RETP07949 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.2■□□□□ 0.02
RETP07949 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 AP003680.1-201ENST00000598970 3660 ntBASIC15.2■□□□□ 0.02
RETP07949 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RETP07949 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.2■□□□□ 0.02
RETP07949 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RETP07949 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RETP07949 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.19■□□□□ 0.02
RETP07949 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RETP07949 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.19■□□□□ 0.02
RETP07949 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
RETP07949 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RETP07949 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RETP07949 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RETP07949 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 287.3 ms