Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM3P06753 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.99■□□□□ 0.31
TPM3P06753 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM3P06753 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 SLED1-202ENST00000512051 380 ntBASIC16.99■□□□□ 0.31
TPM3P06753 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM3P06753 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.99■□□□□ 0.31
TPM3P06753 AC105021.1-202ENST00000570572 669 ntBASIC16.99■□□□□ 0.31
TPM3P06753 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 FAM197Y3-203ENST00000618346 717 ntBASIC16.99■□□□□ 0.31
TPM3P06753 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TPM3P06753 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TPM3P06753 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM3P06753 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM3P06753 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TPM3P06753 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TPM3P06753 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.98■□□□□ 0.31
TPM3P06753 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 REXO1L4P-201ENST00000605109 1937 ntBASIC16.98■□□□□ 0.31
TPM3P06753 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
TPM3P06753 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.98■□□□□ 0.31
TPM3P06753 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TPM3P06753 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 AL133267.1-201ENST00000398220 340 ntBASIC16.98■□□□□ 0.31
TPM3P06753 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM3P06753 TARDBPP1-201ENST00000442013 1203 ntBASIC16.98■□□□□ 0.31
TPM3P06753 AL592309.1-201ENST00000443127 649 ntBASIC16.98■□□□□ 0.31
TPM3P06753 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM3P06753 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM3P06753 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
TPM3P06753 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.98■□□□□ 0.31
TPM3P06753 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM3P06753 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.98■□□□□ 0.31
TPM3P06753 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.98■□□□□ 0.31
TPM3P06753 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPM3P06753 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TPM3P06753 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.98■□□□□ 0.31
TPM3P06753 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPM3P06753 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 AC130686.1-201ENST00000622936 2466 ntBASIC16.97■□□□□ 0.31
TPM3P06753 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TPM3P06753 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TPM3P06753 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms