Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL109954.1-202ENST00000564051 2148 ntBASIC16.88■□□□□ 0.29
GGPS1O95749 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GGPS1O95749 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
GGPS1O95749 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GGPS1O95749 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GGPS1O95749 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.87■□□□□ 0.29
GGPS1O95749 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 NKAIN1P1-201ENST00000435754 582 ntBASIC16.87■□□□□ 0.29
GGPS1O95749 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.87■□□□□ 0.29
GGPS1O95749 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.87■□□□□ 0.29
GGPS1O95749 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.87■□□□□ 0.29
GGPS1O95749 AL136301.1-201ENST00000615830 422 ntBASIC16.87■□□□□ 0.29
GGPS1O95749 AC068587.10-201ENST00000641210 219 ntBASIC16.87■□□□□ 0.29
GGPS1O95749 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.87■□□□□ 0.29
GGPS1O95749 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GGPS1O95749 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GGPS1O95749 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.86■□□□□ 0.29
GGPS1O95749 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 AC126365.1-201ENST00000578585 1514 ntBASIC16.86■□□□□ 0.29
GGPS1O95749 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 RN7SKP230-201ENST00000365642 335 ntBASIC16.86■□□□□ 0.29
GGPS1O95749 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
GGPS1O95749 AC005077.2-201ENST00000449786 690 ntBASIC16.86■□□□□ 0.29
GGPS1O95749 IGHJ2P-201ENST00000454480 60 ntBASIC16.86■□□□□ 0.29
GGPS1O95749 AC021723.1-201ENST00000486306 515 ntBASIC16.86■□□□□ 0.29
GGPS1O95749 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.86■□□□□ 0.29
GGPS1O95749 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.86■□□□□ 0.29
GGPS1O95749 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.86■□□□□ 0.29
GGPS1O95749 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.86■□□□□ 0.29
GGPS1O95749 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
GGPS1O95749 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
GGPS1O95749 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.86■□□□□ 0.29
GGPS1O95749 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GGPS1O95749 REXO1L2P-201ENST00000425429 2069 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms