Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AC241585.1-201ENST00000433527 519 ntBASIC13.69□□□□□ -0.22
PPP1R3DO95685 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 SPDYE18-201ENST00000510091 1050 ntBASIC13.69□□□□□ -0.22
PPP1R3DO95685 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PPP1R3DO95685 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PPP1R3DO95685 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 TSSK5P-201ENST00000423978 907 ntBASIC13.68□□□□□ -0.22
PPP1R3DO95685 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 AC092183.1-201ENST00000469884 875 ntBASIC13.68□□□□□ -0.22
PPP1R3DO95685 GAPDHP40-201ENST00000505218 1006 ntBASIC13.68□□□□□ -0.22
PPP1R3DO95685 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.68□□□□□ -0.22
PPP1R3DO95685 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PPP1R3DO95685 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 AL137783.1-201ENST00000623494 1896 ntBASIC13.67□□□□□ -0.22
PPP1R3DO95685 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PPP1R3DO95685 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PPP1R3DO95685 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PPP1R3DO95685 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PPP1R3DO95685 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PPP1R3DO95685 HSPA7-201ENST00000445535 1927 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms