Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKL5O76039 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDKL5O76039 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDKL5O76039 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKL5O76039 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKL5O76039 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 AC007686.3-201ENST00000619017 3487 ntBASIC17.55■□□□□ 0.4
CDKL5O76039 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKL5O76039 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKL5O76039 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKL5O76039 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKL5O76039 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDKL5O76039 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 ACTG1P3-201ENST00000431775 1114 ntBASIC17.54■□□□□ 0.4
CDKL5O76039 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.54■□□□□ 0.4
CDKL5O76039 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.54■□□□□ 0.4
CDKL5O76039 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.54■□□□□ 0.4
CDKL5O76039 PTP4A1P2-201ENST00000546033 454 ntBASIC17.54■□□□□ 0.4
CDKL5O76039 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKL5O76039 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 AC140479.7-201ENST00000636301 2332 ntBASIC17.54■□□□□ 0.4
CDKL5O76039 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKL5O76039 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKL5O76039 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL5O76039 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDKL5O76039 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDKL5O76039 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDKL5O76039 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDKL5O76039 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 TLE1P1-201ENST00000422965 589 ntBASIC17.53■□□□□ 0.4
CDKL5O76039 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 AC011495.1-201ENST00000498085 584 ntBASIC17.53■□□□□ 0.4
CDKL5O76039 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL5O76039 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKL5O76039 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.53■□□□□ 0.4
CDKL5O76039 AC138761.1-201ENST00000584393 385 ntBASIC17.53■□□□□ 0.4
CDKL5O76039 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKL5O76039 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKL5O76039 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms