Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 VENTXP3-201ENST00000546480 773 ntBASIC6.52□□□□□ -1.37
USH2AO75445 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC6.52□□□□□ -1.37
USH2AO75445 BMF-206ENST00000558774 671 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 FAS-202ENST00000352159 1722 ntTSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 AL080243.1-201ENST00000423293 1060 ntBASIC6.52□□□□□ -1.37
USH2AO75445 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 AC008494.1-201ENST00000497612 796 ntBASIC6.52□□□□□ -1.37
USH2AO75445 ISL1-203ENST00000511384 981 ntTSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 AL022334.2-201ENST00000610000 484 ntBASIC6.52□□□□□ -1.37
USH2AO75445 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 AC007679.1-201ENST00000458609 502 ntBASIC6.52□□□□□ -1.37
USH2AO75445 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
USH2AO75445 ALG1L3P-201ENST00000503331 765 ntBASIC6.52□□□□□ -1.37
USH2AO75445 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 ANKRD26P1-203ENST00000569528 966 ntBASIC6.52□□□□□ -1.37
USH2AO75445 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC6.52□□□□□ -1.37
USH2AO75445 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USH2AO75445 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USH2AO75445 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USH2AO75445 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC6.51□□□□□ -1.37
USH2AO75445 RN7SL672P-201ENST00000474091 317 ntBASIC6.51□□□□□ -1.37
USH2AO75445 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC6.51□□□□□ -1.37
USH2AO75445 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 REXO1L4P-201ENST00000605109 1937 ntBASIC6.51□□□□□ -1.37
USH2AO75445 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 GOLGA6L16P-201ENST00000441780 1299 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms