Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CPNE3O75131 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 RNU1-114P-201ENST00000365297 166 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CPNE3O75131 SSR1P1-201ENST00000407630 814 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 KLF2P2-201ENST00000416807 1039 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.58□□□□□ -0.08
CPNE3O75131 AC026954.1-201ENST00000429771 1293 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.58□□□□□ -0.08
CPNE3O75131 AC004066.1-201ENST00000502488 802 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.58□□□□□ -0.08
CPNE3O75131 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.58□□□□□ -0.08
CPNE3O75131 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 AC084364.1-201ENST00000551967 1556 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 AC007686.3-201ENST00000619017 3487 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 AC015656.1-201ENST00000624209 3578 ntBASIC14.58□□□□□ -0.08
CPNE3O75131 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CPNE3O75131 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.58□□□□□ -0.08
CPNE3O75131 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.58□□□□□ -0.08
CPNE3O75131 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CPNE3O75131 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CPNE3O75131 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE3O75131 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 FAM197Y7-201ENST00000432892 766 ntBASIC14.57□□□□□ -0.08
CPNE3O75131 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE3O75131 AC022494.1-201ENST00000466044 728 ntBASIC14.57□□□□□ -0.08
CPNE3O75131 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE3O75131 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 AC132938.4-201ENST00000623835 848 ntBASIC14.57□□□□□ -0.08
CPNE3O75131 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.57□□□□□ -0.08
CPNE3O75131 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CPNE3O75131 AC127383.1-201ENST00000444697 1800 ntBASIC14.57□□□□□ -0.08
CPNE3O75131 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CPNE3O75131 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CPNE3O75131 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms