Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SCN2BO60939 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
SCN2BO60939 AL354702.1-201ENST00000442006 1960 ntBASIC14.34□□□□□ -0.11
SCN2BO60939 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCN2BO60939 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.33□□□□□ -0.11
SCN2BO60939 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN2BO60939 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN2BO60939 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN2BO60939 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.11
SCN2BO60939 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SCN2BO60939 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN2BO60939 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
SCN2BO60939 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN2BO60939 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.33□□□□□ -0.11
SCN2BO60939 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SCN2BO60939 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCN2BO60939 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.33□□□□□ -0.11
SCN2BO60939 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SCN2BO60939 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.33□□□□□ -0.12
SCN2BO60939 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 TPT1P11-201ENST00000458482 498 ntBASIC14.33□□□□□ -0.12
SCN2BO60939 RN7SL399P-201ENST00000471648 279 ntBASIC14.33□□□□□ -0.12
SCN2BO60939 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.33□□□□□ -0.12
SCN2BO60939 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.33□□□□□ -0.12
SCN2BO60939 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SCN2BO60939 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.33□□□□□ -0.12
SCN2BO60939 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.33□□□□□ -0.12
SCN2BO60939 AL390955.2-201ENST00000603032 514 ntBASIC14.33□□□□□ -0.12
SCN2BO60939 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.33□□□□□ -0.12
SCN2BO60939 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SCN2BO60939 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 AC117489.1-201ENST00000625169 3217 ntBASIC14.33□□□□□ -0.12
SCN2BO60939 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCN2BO60939 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 AC136759.1-202ENST00000530858 2194 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
SCN2BO60939 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SCN2BO60939 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.32□□□□□ -0.12
SCN2BO60939 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.32□□□□□ -0.12
SCN2BO60939 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.32□□□□□ -0.12
SCN2BO60939 IGHV3-42-201ENST00000520410 361 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.32□□□□□ -0.12
SCN2BO60939 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms