Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.52■□□□□ 0.39
CTNND1O60716 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.52■□□□□ 0.39
CTNND1O60716 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.52■□□□□ 0.39
CTNND1O60716 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CTNND1O60716 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CTNND1O60716 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
CTNND1O60716 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTNND1O60716 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTNND1O60716 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTNND1O60716 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTNND1O60716 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTNND1O60716 ISCA2P1-201ENST00000425548 448 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CTNND1O60716 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.51■□□□□ 0.39
CTNND1O60716 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 AC103988.2-201ENST00000561804 725 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.51■□□□□ 0.39
CTNND1O60716 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.51■□□□□ 0.39
CTNND1O60716 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTNND1O60716 AC008805.1-201ENST00000590892 364 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.51■□□□□ 0.39
CTNND1O60716 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNND1O60716 NAP1L6-202ENST00000641404 1222 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNND1O60716 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CTNND1O60716 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 FAM90A7P-201ENST00000382628 1395 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 FAM90A23P-201ENST00000400136 1395 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 LILRP1-201ENST00000444199 1370 ntBASIC17.51■□□□□ 0.39
CTNND1O60716 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNND1O60716 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNND1O60716 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 AC003102.2-201ENST00000589195 1469 ntBASIC17.5■□□□□ 0.39
CTNND1O60716 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNND1O60716 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CTNND1O60716 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNND1O60716 PDIA3P2-201ENST00000428073 158 ntBASIC17.5■□□□□ 0.39
CTNND1O60716 RCC2P8-201ENST00000502779 1035 ntBASIC17.5■□□□□ 0.39
CTNND1O60716 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.5■□□□□ 0.39
CTNND1O60716 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.5■□□□□ 0.39
CTNND1O60716 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.5■□□□□ 0.39
CTNND1O60716 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNND1O60716 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNND1O60716 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CTNND1O60716 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTNND1O60716 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNND1O60716 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNND1O60716 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNND1O60716 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNND1O60716 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNND1O60716 MBLAC2-202ENST00000514906 1936 ntBASIC17.49■□□□□ 0.39
CTNND1O60716 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms