Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.39□□□□□ -0.59
SNAI2O43623 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 AZGP1P1-201ENST00000411909 902 ntBASIC11.39□□□□□ -0.59
SNAI2O43623 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.39□□□□□ -0.59
SNAI2O43623 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.39□□□□□ -0.59
SNAI2O43623 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 RNA5SP419-201ENST00000515908 135 ntBASIC11.39□□□□□ -0.59
SNAI2O43623 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.39□□□□□ -0.59
SNAI2O43623 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
SNAI2O43623 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SNAI2O43623 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
SNAI2O43623 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SNAI2O43623 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SNAI2O43623 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
SNAI2O43623 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SNAI2O43623 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SNAI2O43623 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 MIR346-201ENST00000362234 95 ntBASIC11.38□□□□□ -0.59
SNAI2O43623 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.38□□□□□ -0.59
SNAI2O43623 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 TFAMP1-201ENST00000412727 736 ntBASIC11.38□□□□□ -0.59
SNAI2O43623 AL355306.1-201ENST00000415580 579 ntBASIC11.38□□□□□ -0.59
SNAI2O43623 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.38□□□□□ -0.59
SNAI2O43623 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 FAAHP1-202ENST00000446499 1238 ntBASIC11.38□□□□□ -0.59
SNAI2O43623 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.38□□□□□ -0.59
SNAI2O43623 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.38□□□□□ -0.59
SNAI2O43623 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.38□□□□□ -0.59
SNAI2O43623 AP001005.1-201ENST00000571755 1248 ntBASIC11.38□□□□□ -0.59
SNAI2O43623 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.38□□□□□ -0.59
SNAI2O43623 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SNAI2O43623 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
SNAI2O43623 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms