Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.12■□□□□ 0.65
KCNQ3O43525 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ3O43525 AL596276.2-201ENST00000447525 331 ntBASIC19.12■□□□□ 0.65
KCNQ3O43525 AL133466.1-201ENST00000447582 150 ntBASIC19.12■□□□□ 0.65
KCNQ3O43525 RCC2P8-201ENST00000502779 1035 ntBASIC19.12■□□□□ 0.65
KCNQ3O43525 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNQ3O43525 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNQ3O43525 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNQ3O43525 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNQ3O43525 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
KCNQ3O43525 MIR3907-201ENST00000579424 151 ntBASIC19.12■□□□□ 0.65
KCNQ3O43525 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
KCNQ3O43525 AC100757.4-201ENST00000626934 759 ntBASIC19.12■□□□□ 0.65
KCNQ3O43525 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
KCNQ3O43525 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KCNQ3O43525 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNQ3O43525 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNQ3O43525 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNQ3O43525 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
KCNQ3O43525 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
KCNQ3O43525 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KCNQ3O43525 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 RN7SKP214-201ENST00000364208 315 ntBASIC19.11■□□□□ 0.65
KCNQ3O43525 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.11■□□□□ 0.65
KCNQ3O43525 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 ISCA2P1-201ENST00000425548 448 ntBASIC19.11■□□□□ 0.65
KCNQ3O43525 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 PDIA3P2-201ENST00000428073 158 ntBASIC19.11■□□□□ 0.65
KCNQ3O43525 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNQ3O43525 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 AC012441.2-201ENST00000444843 739 ntBASIC19.11■□□□□ 0.65
KCNQ3O43525 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
KCNQ3O43525 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNQ3O43525 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNQ3O43525 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.11■□□□□ 0.65
KCNQ3O43525 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.11■□□□□ 0.65
KCNQ3O43525 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.11■□□□□ 0.65
KCNQ3O43525 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KCNQ3O43525 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNQ3O43525 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 AC006486.2-201ENST00000624246 2199 ntBASIC19.1■□□□□ 0.65
KCNQ3O43525 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KCNQ3O43525 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.1■□□□□ 0.65
KCNQ3O43525 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KCNQ3O43525 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 ELK2AP-201ENST00000392510 1007 ntBASIC19.1■□□□□ 0.65
KCNQ3O43525 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 AC073150.1-201ENST00000450406 1084 ntBASIC19.1■□□□□ 0.65
KCNQ3O43525 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.1■□□□□ 0.65
KCNQ3O43525 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
KCNQ3O43525 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.1■□□□□ 0.65
KCNQ3O43525 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
KCNQ3O43525 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KCNQ3O43525 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KCNQ3O43525 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KCNQ3O43525 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms