Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC20.25■□□□□ 0.83
CHD2O14647 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD2O14647 AC023968.2-201ENST00000560593 1049 ntBASIC20.25■□□□□ 0.83
CHD2O14647 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD2O14647 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.25■□□□□ 0.83
CHD2O14647 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.25■□□□□ 0.83
CHD2O14647 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD2O14647 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD2O14647 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.24■□□□□ 0.83
CHD2O14647 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHD2O14647 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHD2O14647 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD2O14647 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.24■□□□□ 0.83
CHD2O14647 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD2O14647 AC068831.5-201ENST00000557387 328 ntBASIC20.24■□□□□ 0.83
CHD2O14647 APOC1-209ENST00000592885 562 ntTSL 3 BASIC20.24■□□□□ 0.83
CHD2O14647 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CHD2O14647 AC126365.1-201ENST00000578585 1514 ntBASIC20.24■□□□□ 0.83
CHD2O14647 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHD2O14647 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.24■□□□□ 0.83
CHD2O14647 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD2O14647 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC20.24■□□□□ 0.83
CHD2O14647 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD2O14647 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.24■□□□□ 0.83
CHD2O14647 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD2O14647 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD2O14647 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD2O14647 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 LINC00528-201ENST00000600723 2160 ntBASIC20.23■□□□□ 0.83
CHD2O14647 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD2O14647 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD2O14647 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHD2O14647 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 LINC00265-2P-201ENST00000413372 782 ntBASIC20.23■□□□□ 0.83
CHD2O14647 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD2O14647 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD2O14647 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD2O14647 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD2O14647 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD2O14647 GOLGA2P7-209ENST00000560408 745 ntBASIC20.23■□□□□ 0.83
CHD2O14647 FTLP5-201ENST00000586853 534 ntBASIC20.23■□□□□ 0.83
CHD2O14647 AC021016.3-201ENST00000608367 477 ntBASIC20.23■□□□□ 0.83
CHD2O14647 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.23■□□□□ 0.83
CHD2O14647 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD2O14647 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD2O14647 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD2O14647 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHD2O14647 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHD2O14647 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms