Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 NSUN5P1-202ENST00000421140 1535 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 NSUN5P2-203ENST00000457352 1529 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 AC127383.1-201ENST00000444697 1800 ntBASIC10.72□□□□□ -0.69
TMEM238C9JI98 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
TMEM238C9JI98 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
TMEM238C9JI98 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AC087164.2-201ENST00000624514 3130 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 RCN1P2-201ENST00000398357 915 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 KRT17P6-201ENST00000453795 1220 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 FAM86EP-206ENST00000510506 987 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
TMEM238C9JI98 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AL049597.2-201ENST00000565575 961 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 AP002414.4-201ENST00000589764 1148 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 BNIP3P18-201ENST00000593976 575 ntBASIC10.71□□□□□ -0.69
TMEM238C9JI98 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.71□□□□□ -0.69
TMEM238C9JI98 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.71□□□□□ -0.7
TMEM238C9JI98 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
TMEM238C9JI98 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
TMEM238C9JI98 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms