Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 INE2-201ENST00000630399 1874 ntBASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 AL354877.1-201ENST00000424412 413 ntBASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 SERPINA13P-202ENST00000478994 924 ntBASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 AC005730.2-201ENST00000564549 1184 ntBASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 AC002472.3-201ENST00000640124 621 ntBASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TBC1D3FA6NER0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC020910.5-201ENST00000623668 1865 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 RN7SKP175-201ENST00000408472 289 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 BX284668.4-201ENST00000453917 508 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 IGHJ2P-201ENST00000454480 60 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC044849.1-201ENST00000519737 1188 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC084346.2-201ENST00000607097 949 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC132872.4-202ENST00000622924 2756 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC023024.2-201ENST00000623561 1993 ntBASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 LILRP1-201ENST00000444199 1370 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms