Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF890P-202ENST00000530367 1156 ntBASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC027612.4-201ENST00000605371 583 ntBASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC073592.8-201ENST00000624126 511 ntBASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC004461.2-201ENST00000629517 803 ntBASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 KRT8P24-201ENST00000560290 1559 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AP000347.1-202ENST00000435868 847 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CNN2P2-201ENST00000443536 909 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CNN2P3-201ENST00000450201 906 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC004066.1-201ENST00000502488 802 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL136317.3-201ENST00000618497 906 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms