Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC006453.1-201ENST00000636037 1257 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AC132872.4-202ENST00000622924 2756 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AC011840.2-201ENST00000563063 1520 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 LINC00554-201ENST00000564841 3011 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AL137783.1-201ENST00000623494 1896 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AL008718.2-201ENST00000609206 1313 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC009093.2-202ENST00000620513 2079 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC007950.2-201ENST00000615045 2347 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 RPL17P11-201ENST00000417593 544 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PDIA3P2-201ENST00000428073 158 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC069218.1-201ENST00000435269 762 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC019193.1-201ENST00000506678 823 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC116345.2-201ENST00000512837 523 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 IGLV3-15-201ENST00000518356 244 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC009779.1-201ENST00000551138 283 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC132192.2-201ENST00000596206 1147 ntBASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC187A0A096LP49 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AC092978.1-202ENST00000637590 1327 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AL136379.1-201ENST00000623471 2642 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms