Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 MIR1224-201ENST00000408193 85 ntBASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 FAAHP1-202ENST00000446499 1238 ntBASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 SLED1-202ENST00000512051 380 ntBASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 KRT8P48-201ENST00000515599 1220 ntBASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AC105021.1-202ENST00000570572 669 ntBASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 CICP8-201ENST00000455800 2813 ntBASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV18A0A075B6X5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 AL133267.1-201ENST00000398220 340 ntBASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 FAM58CP-201ENST00000435741 640 ntBASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 AC022447.6-201ENST00000515522 438 ntBASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 AC092902.6-201ENST00000641783 218 ntBASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV18A0A075B6X5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV18A0A075B6X5 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms