Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 AC011247.3-201ENST00000603297 438 ntBASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDC42BPBQ9Y5S2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 PPP1R2P4-201ENST00000424051 595 ntBASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 RPL18AP8-201ENST00000486071 528 ntBASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 IGHV1-12-201ENST00000518307 205 ntBASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 DOC2GP-204ENST00000639052 2548 ntBASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 HERC2P11-201ENST00000562845 725 ntBASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 AC100756.2-201ENST00000569537 736 ntBASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPBQ9Y5S2 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 BCAS2P2-201ENST00000425064 674 ntBASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 AC084752.1-201ENST00000509766 622 ntBASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 DNM1P51-201ENST00000558149 522 ntBASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 AC012073.1-201ENST00000606114 1108 ntBASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 AGGF1P1-201ENST00000509500 2073 ntBASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CDC42BPBQ9Y5S2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 PPIA-208ENST00000489459 907 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AL133467.4-201ENST00000602953 725 ntBASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 PPIA-210ENST00000620047 827 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AL591122.2-201ENST00000624125 1853 ntBASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms