Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 AL135744.1-201ENST00000565098 629 ntBASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 LILRP1-201ENST00000444199 1370 ntBASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RCL1Q9Y2P8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.4□□□□□ -0.42
RCL1Q9Y2P8 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms