Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AC093433.1-201ENST00000458048 571 ntBASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AC004066.1-201ENST00000502488 802 ntBASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 PTP4A1P2-201ENST00000546033 454 ntBASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AP001063.1-201ENST00000568332 529 ntBASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AC006058.4-201ENST00000624016 1670 ntBASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 AC148477.4-201ENST00000613430 1793 ntBASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 OR2I1P-209ENST00000641730 5365 ntBASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC023024.2-201ENST00000623561 1993 ntBASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 ACTG1P3-201ENST00000431775 1114 ntBASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC009486.1-201ENST00000569860 813 ntBASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC015936.2-201ENST00000593177 259 ntBASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC068587.10-201ENST00000641210 219 ntBASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms