Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 FAM8A4P-201ENST00000435433 1213 ntBASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 ZNF767P-206ENST00000513792 565 ntBASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AP006547.1-201ENST00000563435 692 ntBASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AC005695.3-201ENST00000614522 232 ntBASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 AC138028.6-201ENST00000616106 1482 ntBASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.29■□□□□ 0.2
SSX2IPQ9Y2D8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 POM121L10P-201ENST00000436994 1285 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AKR7A2P1-201ENST00000460134 915 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 SCARNA20.5-201ENST00000516991 142 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC022616.1-201ENST00000518688 554 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC244157.2-201ENST00000616239 1006 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC084364.1-201ENST00000551967 1556 ntBASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.28■□□□□ 0.2
SSX2IPQ9Y2D8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 AL158070.2-201ENST00000623713 1621 ntBASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.27■□□□□ 0.2
SSX2IPQ9Y2D8 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms