Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC011474.4-201ENST00000623523 2076 ntBASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 TREML5P-201ENST00000421694 576 ntBASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC097493.3-201ENST00000509725 367 ntBASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 AC152010.1-201ENST00000415779 2006 ntBASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
HHLA3Q9XRX5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC067750.1-201ENST00000608826 6545 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC087499.5-201ENST00000452760 1342 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC105206.1-202ENST00000314927 2368 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC113367.3-201ENST00000508316 1912 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms