Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 CALR4P-201ENST00000431943 946 ntBASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 AC020914.3-201ENST00000594712 304 ntBASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 AC003102.2-201ENST00000589195 1469 ntBASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 LINC00528-201ENST00000600723 2160 ntBASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 AC011270.2-201ENST00000624293 2550 ntBASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND2AQ9ULE3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 BX284668.4-201ENST00000453917 508 ntBASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 SERPINA13P-202ENST00000478994 924 ntBASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 SCARNA20.5-201ENST00000516991 142 ntBASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 AL023803.2-201ENST00000620080 638 ntBASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
DENND2AQ9ULE3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 AC010141.1-201ENST00000411585 623 ntBASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.16■□□□□ 0.5
DENND2AQ9ULE3 AL451050.2-201ENST00000606967 682 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms