Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 TUBB8P8-201ENST00000458717 1058 ntBASIC20■□□□□ 0.79
NPC1L1Q9UHC9 AC092658.1-201ENST00000505836 891 ntBASIC20■□□□□ 0.79
NPC1L1Q9UHC9 ZNF767P-206ENST00000513792 565 ntBASIC20■□□□□ 0.79
NPC1L1Q9UHC9 FAM8A2P-201ENST00000528813 1142 ntBASIC20■□□□□ 0.79
NPC1L1Q9UHC9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MIR6869-201ENST00000619434 62 ntBASIC20■□□□□ 0.79
NPC1L1Q9UHC9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
NPC1L1Q9UHC9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 FAM86MP-201ENST00000340703 885 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AC012441.2-201ENST00000444843 739 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 KRT8P29-201ENST00000420409 1371 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AP001267.2-201ENST00000532619 2086 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AL008718.2-201ENST00000609206 1313 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 AC099063.4-201ENST00000641099 1602 ntBASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1L1Q9UHC9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 AC004898.1-201ENST00000451057 766 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 SORD2P-201ENST00000558556 1069 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 AC104982.3-201ENST00000581995 514 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 AC090505.1-201ENST00000430515 1834 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 AC015688.4-201ENST00000580780 1647 ntBASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms