Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 HERC2P11-201ENST00000562845 725 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AC100756.2-201ENST00000569537 736 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AC007952.4-201ENST00000573866 637 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AC002044.2-201ENST00000624910 970 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AC084018.2-201ENST00000613093 2607 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AL157414.3-201ENST00000624276 1954 ntBASIC13.79□□□□□ -0.2
DKK4Q9UBT3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DKK4Q9UBT3 AC127383.1-201ENST00000444697 1800 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 BRI3P1-201ENST00000440440 378 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 AC018638.5-201ENST00000450885 754 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 RN7SL530P-201ENST00000485097 298 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 AC083801.1-201ENST00000491689 358 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 MST1L-201ENST00000442552 2185 ntBASIC13.78□□□□□ -0.2
DKK4Q9UBT3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
DKK4Q9UBT3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
DKK4Q9UBT3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DKK4Q9UBT3 AC010491.1-201ENST00000563101 2797 ntBASIC13.77□□□□□ -0.2
DKK4Q9UBT3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
DKK4Q9UBT3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DKK4Q9UBT3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DKK4Q9UBT3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
DKK4Q9UBT3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.77□□□□□ -0.21
DKK4Q9UBT3 OR51A9P-201ENST00000422578 911 ntBASIC13.77□□□□□ -0.21
DKK4Q9UBT3 CTBP2P8-201ENST00000422584 1330 ntBASIC13.77□□□□□ -0.21
DKK4Q9UBT3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms