Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 AL022328.1-201ENST00000610050 478 ntBASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.72■□□□□ 0.27
BLOC1S4Q9NUP1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 CNN2P8-201ENST00000421872 913 ntBASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 FAM197Y7-201ENST00000432892 766 ntBASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 GAPDHP21-201ENST00000450301 1010 ntBASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BLOC1S4Q9NUP1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.71■□□□□ 0.26
BLOC1S4Q9NUP1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BLOC1S4Q9NUP1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
BLOC1S4Q9NUP1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
BLOC1S4Q9NUP1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
BLOC1S4Q9NUP1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BLOC1S4Q9NUP1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 AC009093.2-202ENST00000620513 2079 ntBASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 CROCCP4-201ENST00000457096 498 ntBASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 KRT90P-201ENST00000549264 1064 ntBASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 AC106820.3-201ENST00000561653 397 ntBASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 AC139749.1-202ENST00000617529 3139 ntBASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BLOC1S4Q9NUP1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms