Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC023908.3-201ENST00000564211 3047 ntBASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC005089.1-201ENST00000619486 2241 ntBASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC007274.1-201ENST00000439805 662 ntBASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC055876.2-201ENST00000531834 546 ntBASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC004233.3-201ENST00000607794 1269 ntBASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 AL157414.3-201ENST00000624276 1954 ntBASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.32□□□□□ -0.12
NEUROD4Q9HD90 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 MTHFR-210ENST00000641407 2387 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 KRT17P7-201ENST00000451704 1104 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 VDAC1P7-201ENST00000462417 847 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC023310.3-201ENST00000557027 670 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC100756.1-201ENST00000562736 682 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC138749.3-201ENST00000567691 622 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC099568.2-201ENST00000609194 695 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC116165.1-201ENST00000611806 668 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AL662799.1-202ENST00000614205 422 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 AC025048.6-201ENST00000634326 1161 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 SBF1P1-201ENST00000444527 5631 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 INTS4P2-202ENST00000614726 2019 ntBASIC14.31□□□□□ -0.12
NEUROD4Q9HD90 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms