Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC026954.1-201ENST00000429771 1293 ntBASIC17.77■□□□□ 0.44
RNF41Q9H4P4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 AC106820.3-201ENST00000561653 397 ntBASIC17.77■□□□□ 0.44
RNF41Q9H4P4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 AC138696.2-201ENST00000607376 223 ntBASIC17.77■□□□□ 0.44
RNF41Q9H4P4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF41Q9H4P4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 AL138725.1-201ENST00000407347 1314 ntBASIC17.76■□□□□ 0.43
RNF41Q9H4P4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 AP000593.2-201ENST00000542775 1433 ntBASIC17.76■□□□□ 0.43
RNF41Q9H4P4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 HLA-V-201ENST00000429037 534 ntBASIC17.76■□□□□ 0.43
RNF41Q9H4P4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 CSF2RBP1-201ENST00000447905 391 ntBASIC17.76■□□□□ 0.43
RNF41Q9H4P4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 OR10B1P-201ENST00000601666 907 ntBASIC17.76■□□□□ 0.43
RNF41Q9H4P4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF41Q9H4P4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 AC003102.2-201ENST00000589195 1469 ntBASIC17.75■□□□□ 0.43
RNF41Q9H4P4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 AC099336.1-201ENST00000417053 1171 ntBASIC17.75■□□□□ 0.43
RNF41Q9H4P4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 MIR4259-201ENST00000584466 101 ntBASIC17.75■□□□□ 0.43
RNF41Q9H4P4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 SALL4P5-201ENST00000419001 1760 ntBASIC17.75■□□□□ 0.43
RNF41Q9H4P4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RNF41Q9H4P4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms