Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AP003392.6-201ENST00000607709 325 ntBASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 AC024909.3-201ENST00000611513 2257 ntBASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE2OQ9C0C9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AC022188.1-201ENST00000620960 1664 ntBASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 ALG1L13P-202ENST00000519320 584 ntBASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AC106820.3-201ENST00000561653 397 ntBASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AL022344.2-201ENST00000568976 968 ntBASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AC005324.6-201ENST00000587972 613 ntBASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 AC011477.6-201ENST00000604980 1927 ntBASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
UBE2OQ9C0C9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 POU5F1P2-201ENST00000521750 823 ntBASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 AL160314.3-201ENST00000556041 767 ntBASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 AC100827.2-201ENST00000563214 1194 ntBASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBE2OQ9C0C9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms