Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 FAM207CP-201ENST00000443486 507 ntBASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM54Q9BYV2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 BRI3BPP1-201ENST00000594224 787 ntBASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM54Q9BYV2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.96□□□□□ -0.02
TRIM54Q9BYV2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 AC140479.7-201ENST00000636301 2332 ntBASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 AC007541.1-201ENST00000570282 1469 ntBASIC14.95□□□□□ -0.02
TRIM54Q9BYV2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms