Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AC004899.1-201ENST00000424687 1714 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AC016700.1-201ENST00000429424 312 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AC012441.2-201ENST00000444843 739 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AL035414.1-201ENST00000451327 857 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AC106794.1-201ENST00000506935 792 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AC027601.3-201ENST00000622907 509 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.87□□□□□ -0.03
HDAC8Q9BY41 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC8Q9BY41 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AL008707.1-201ENST00000422498 534 ntBASIC14.86□□□□□ -0.03
HDAC8Q9BY41 EIF4HP1-201ENST00000453115 687 ntBASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 NDUFV2P1-201ENST00000596415 907 ntBASIC14.86□□□□□ -0.03
HDAC8Q9BY41 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms