Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 CES1P2-201ENST00000566467 1242 ntBASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL25A1Q9BXS0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 TUBB2BP1-201ENST00000404155 871 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 RN7SL277P-201ENST00000481521 288 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 RPSAP70-201ENST00000504462 864 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AL353708.1-201ENST00000567904 1257 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AC009041.4-201ENST00000620075 638 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AC091905.3-201ENST00000624959 234 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 AC004408.2-201ENST00000623613 2777 ntBASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL25A1Q9BXS0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC017007.3-201ENST00000479865 435 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 GOLGA2P8-201ENST00000505201 779 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC095040.1-201ENST00000513286 675 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 OR52V1P-201ENST00000515557 898 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC104117.4-201ENST00000521486 847 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms