Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AL356585.2-201ENST00000625078 2396 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC089987.1-201ENST00000551654 2209 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 MST1P2-201ENST00000457982 2291 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC007541.1-201ENST00000570282 1469 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AL132655.2-201ENST00000596276 594 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AL662799.1-202ENST00000614205 422 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC004461.2-201ENST00000629517 803 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC097359.2-201ENST00000604992 2389 ntBASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TUBA1CQ9BQE3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.33□□□□□ -0.11
TUBA1CQ9BQE3 AC099521.3-201ENST00000624251 2938 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms