Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AL133267.1-201ENST00000398220 340 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 RBPMS2P1-201ENST00000437762 623 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 KRT18P58-201ENST00000527480 1120 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AL133215.2-201ENST00000609242 977 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AC007967.4-201ENST00000614700 386 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 MIR6069-201ENST00000620069 79 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 AL031595.1-201ENST00000623969 4709 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 MTHFR-210ENST00000641407 2387 ntBASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.01□□□□□ -0.33
CMSS1Q9BQ75 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 MBLAC2-202ENST00000514906 1936 ntBASIC13□□□□□ -0.33
CMSS1Q9BQ75 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 AL627223.1-201ENST00000416693 442 ntBASIC13□□□□□ -0.33
CMSS1Q9BQ75 FAM58DP-201ENST00000428076 619 ntBASIC13□□□□□ -0.33
CMSS1Q9BQ75 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CMSS1Q9BQ75 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CMSS1Q9BQ75 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms