Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 TPM3P8-201ENST00000330554 643 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 FAM197Y7-201ENST00000432892 766 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 KRT17P8-201ENST00000540749 863 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 KRT90P-201ENST00000549264 1064 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 AL162274.1-201ENST00000617191 1098 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 CLUHP2-201ENST00000426660 1303 ntBASIC12.54□□□□□ -0.4
GAFA1Q96PS6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GAFA1Q96PS6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC018529.2-202ENST00000611482 3087 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC112492.5-201ENST00000421897 457 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC007969.1-201ENST00000433675 447 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC234783.1-201ENST00000441761 496 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 MESTP3-201ENST00000503460 968 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 RNA5SP486-201ENST00000515961 83 ntBASIC12.53□□□□□ -0.4
GAFA1Q96PS6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GAFA1Q96PS6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms