Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 AC007292.2-201ENST00000593524 1812 ntBASIC17.34■□□□□ 0.37
CDCA5Q96FF9 AL022334.2-201ENST00000610000 484 ntBASIC17.34■□□□□ 0.37
CDCA5Q96FF9 NKILA-202ENST00000614771 2598 ntBASIC17.34■□□□□ 0.37
CDCA5Q96FF9 AC073592.2-201ENST00000623062 780 ntBASIC17.34■□□□□ 0.37
CDCA5Q96FF9 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 LINC01815-202ENST00000641468 1409 ntBASIC17.34■□□□□ 0.37
CDCA5Q96FF9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA5Q96FF9 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 DPY19L2P5-201ENST00000456300 331 ntBASIC17.33■□□□□ 0.36
CDCA5Q96FF9 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 MIR4472-1-201ENST00000584349 80 ntBASIC17.33■□□□□ 0.36
CDCA5Q96FF9 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 AP003392.6-201ENST00000607709 325 ntBASIC17.33■□□□□ 0.36
CDCA5Q96FF9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 LINC02199-201ENST00000506655 2702 ntBASIC17.33■□□□□ 0.36
CDCA5Q96FF9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.33■□□□□ 0.36
CDCA5Q96FF9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 RNA5SP417-201ENST00000516459 108 ntBASIC17.32■□□□□ 0.36
CDCA5Q96FF9 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC003686.1-201ENST00000550956 1034 ntBASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms