Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKL2Q92772 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDKL2Q92772 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDKL2Q92772 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC117489.1-201ENST00000625169 3217 ntBASIC15.3■□□□□ 0.04
CDKL2Q92772 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.3■□□□□ 0.04
CDKL2Q92772 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL2Q92772 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.3■□□□□ 0.04
CDKL2Q92772 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL2Q92772 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.3■□□□□ 0.04
CDKL2Q92772 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL2Q92772 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC015911.4-201ENST00000588022 1070 ntBASIC15.3■□□□□ 0.04
CDKL2Q92772 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKL2Q92772 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC079781.4-201ENST00000641908 219 ntBASIC15.3■□□□□ 0.04
CDKL2Q92772 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDKL2Q92772 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKL2Q92772 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKL2Q92772 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKL2Q92772 AC097359.2-201ENST00000604992 2389 ntBASIC15.29■□□□□ 0.04
CDKL2Q92772 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL2Q92772 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 AC018665.1-201ENST00000622927 1362 ntBASIC15.29■□□□□ 0.04
CDKL2Q92772 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL2Q92772 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKL2Q92772 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CDKL2Q92772 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.29■□□□□ 0.04
CDKL2Q92772 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
CDKL2Q92772 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
CDKL2Q92772 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL2Q92772 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 AL158211.3-201ENST00000607385 239 ntBASIC15.29■□□□□ 0.04
CDKL2Q92772 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.29■□□□□ 0.04
CDKL2Q92772 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKL2Q92772 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms