Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC018442.1-201ENST00000421439 2061 ntBASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC092580.3-201ENST00000430932 139 ntBASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC097493.3-201ENST00000509725 367 ntBASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AP001267.2-201ENST00000532619 2086 ntBASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RTN4IP1Q8WWV3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC012508.2-201ENST00000567613 1472 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 Z97205.2-201ENST00000564697 1639 ntBASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RTN4IP1Q8WWV3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms