Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 SCARNA21-201ENST00000517026 139 ntBASIC25.67■■□□□ 1.7
TRIM41Q8WV44 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC25.67■■□□□ 1.7
TRIM41Q8WV44 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 AL132780.4-201ENST00000624870 1135 ntBASIC25.66■■□□□ 1.7
TRIM41Q8WV44 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRIM41Q8WV44 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 MPV17-205ENST00000402310 906 ntTSL 5 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 HNRNPA1P58-201ENST00000403629 610 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 CD8B2-202ENST00000417670 633 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 POM121L8P-201ENST00000417732 1281 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 POM121L9P-203ENST00000441984 1285 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 AC020922.3-201ENST00000595064 547 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 AC004686.1-201ENST00000605113 538 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 AL137783.1-201ENST00000623494 1896 ntBASIC25.65■■□□□ 1.7
TRIM41Q8WV44 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRIM41Q8WV44 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 AL162727.3-201ENST00000635661 2787 ntBASIC25.64■■□□□ 1.7
TRIM41Q8WV44 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 AC026434.2-201ENST00000506094 1078 ntBASIC25.64■■□□□ 1.7
TRIM41Q8WV44 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC25.64■■□□□ 1.7
TRIM41Q8WV44 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TRIM41Q8WV44 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRIM41Q8WV44 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms